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2008~2009年の研究業績

2008年から2009年までに当研究室が論文として発表した研究業績の一覧です。

Jump_to: 最近(2010年以降)
 2009年 / 2008年
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2009年

  • Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action
  • Ogura K, Yamasaki M, Yamada T, Mikami B, Hashimoto W, Murata K
  • J Biol Chem. 2009 Dec 18;284(51):35572-35579.  » [Pubmed]
  • Crystallization and preliminary X-ray analysis of 4-pyridoxolactonase from Mesorhizobium loti
  • Matsuda S, Yokochi N, Yoshikane Y, Kobayashi J, Huy CN, Baba S, Kuramitsu S, Mikami B, Yagi T
  • Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Sep 1;65(Pt 9):886-889. Epub 2009 Aug 22.  » [Pubmed]
  • Substrate specificity of streptococcal unsaturated glucuronyl hydrolases for sulfated glycosaminoglycan
  • Maruyama Y, Nakamichi Y, Itoh T, Mikami B, Hashimoto W, Murata K
  • J Biol Chem. 2009 Jul 3;284(27):18059-18069. Epub 2009 May 5.  » [Pubmed]
  • Two crystal structures of lysyl-tRNA synthetase from Bacillus stearothermophilus in complex with lysyladenylate-like compounds: insights into the irreversible formation of the enzyme-bound adenylate of L-lysine hydroxamate
  • Sakurama H, Takita T, Mikami B, Itoh T, Yasukawa K, Inouye K
  • J Biochem. 2009 May;145(5):555-563. Epub 2009 Jan 27.  » [Pubmed]
  • Crystallization and preliminary crystallographic analysis of the cell-surface alginate-binding protein Algp7 isolated from Sphingomonas sp. A1
  • Hashimoto W, Ochiai A, He J, Itoh T, Mikami B, Murata K
  • Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 May 1;65(Pt 5):515-517. Epub 2009 Apr 24.  » [Pubmed]
  • The 2.1-Å crystal structure of native neuroserpin reveals unique structural elements that contribute to conformational instability
  • Takehara S, Onda M, Zhang J, Nishiyama M, Yang X, Mikami B, Lomas DA
  • J Mol Biol. 2009 Apr 24;388(1):11-20. Epub 2009 Mar 10.  » [Pubmed]
  • Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases
  • Ochiai A, Itoh T, Mikami B, Hashimoto W, Murata K
  • J Biol Chem. 2009 Apr 10;284(15):10181-10189. Epub 2009 Feb 4.  » [Pubmed]
  • Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ
  • Hashimoto W, Ochiai A, Momma K, Itoh T, Mikami B, Maruyama Y, Murata K
  • Biochem Biophys Res Commun. 2009 Mar 27;381(1):16-21. Epub 2009 Feb 7.  » [Pubmed]

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2008年

  • Structure of 3-deoxy-manno-octulosonate cytidylyltransferase from Haemophilus influenzae complexed with the substrate 3-deoxy-manno-octulosonate in the β-configuration
  • Yoon HJ, Ku MJ, Mikami B, Suh SW
  • Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1292-1294. Epub 2008 Nov 18.  » [Pubmed]
  • The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase
  • Tsuruta H, Mikami B, Yamamoto C, Yamagata H
  • FEBS J. 2008 Sep;275(17):4317-4328. Epub 2008 Jul 18.  » [Pubmed]
  • Substrate recognition by family 7 alginate lyase from Sphingomonas sp. A1
  • Ogura K, Yamasaki M, Mikami B, Hashimoto W, Murata K
  • J Mol Biol. 2008 Jul 4;380(2):373-385. Epub 2008 May 11.  » [Pubmed]
  • Cleaved serpin refolds into the relaxed state via a stressed conformer
  • Onda M, Nakatani K, Takehara S, Nishiyama M, Takahashi N, Hirose M
  • J Biol Chem. 2008 Jun 20;283(25):17568-17578. Epub 2008 Apr 7.  » [Pubmed]
  • Characterization and crystallography of recombinant 7S globulins of Adzuki bean and structure-function relationships with 7S globulins of various crops
  • Fukuda T, Maruyama N, Salleh MR, Mikami B, Utsumi S
  • J Agric Food Chem. 2008 Jun 11;56(11):4145-4153. Epub 2008 May 8.  » [Pubmed]
  • Crystal structure of UDP-N-acetylglucosamine enolpyruvyl transferase from Haemophilus influenzae in complex with UDP-N-acetylglucosamine and fosfomycin
  • Yoon HJ, Lee SJ, Mikami B, Park HJ, Yoo J, Suh SW
  • Proteins. 2008 May 1;71(2):1032-1037.  » [Pubmed]
  • Crystal structure of YihS in complex with D-mannose: structural annotation of Escherichia coli and Salmonella enterica yihS-encoded proteins to an aldose-ketose isomerase
  • Itoh T, Mikami B, Hashimoto W, Murata K
  • J Mol Biol. 2008 Apr 11;377(5):1443-1459. Epub 2008 Feb 12.  » [Pubmed]
  • The PD-1/PD-L1 complex resembles the antigen-binding Fv domains of antibodies and T cell receptors
  • Lin DY, Tanaka Y, Iwasaki M, Gittis AG, Su HP, Mikami B, Okazaki T, Honjo T, Minato N, Garboczi DN
  • Proc Natl Acad Sci U S A. 2008 Feb 26;105(8):3011-3016. Epub 2008 Feb 14.  » [Pubmed]
  • Crystal structure of a novel bacterial cell-surface flagellin binding to a polysaccharide
  • Maruyama Y, Momma M, Mikami B, Hashimoto W, Murata K
  • Biochemistry. 2008 Feb 5;47(5):1393-1402. Epub 2008 Jan 12.  » [Pubmed]
  • Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
  • Yoshikane Y, Yokochi N, Yamasaki M, Mizutani K, Ohnishi K, Mikami B, Hayashi H, Yagi T
  • J Biol Chem. 2008 Jan 11;283(2):1120-1127. Epub 2007 Nov 6.  » [Pubmed]
  • Comparison of molecular packing between two kinds of hen egg-white lysozyme orthorhombic crystals
  • Aibara S, Mizutani K, Suzuki A, Horiuchi H, Hashimoto K, Yamane T
  • J Jpn Soc Microgravity Appl. 2008;25(2):82-88.
  • [Review] Superchannel of bacteria: biological significance and new horizons
  • Murata K, Kawai S, Mikami B, Hashimoto W
  • Biosci Biotechnol Biochem. 2008 Feb;72(2):265-277. Epub 2008 Feb 7.  » [Pubmed]

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